Sci Transl Med Table of Contents for 27 May 2015; Vol. 7, No. 289

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Science/AAAS Science Translational Medicine

Table of Contents
 

05/27/15 Volume 7, Issue 289


<!–GTC–>

Congratulations to Nicholas Navin from MD Anderson Cancer Center on winning the 2015 AAAS Martin and Rose Wachtel Cancer Research Award, and to the runners up, Agnel Sfeir (NYU) and Nitzan Rosenfeld (Cambridge).

<!–DMM

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Biomedical

Last chance to register for Bridging Biomedical Worlds “From Neural Circuitry to Neurotechnology” in Tokyo.

–> <!–EC

Science Translational Medicine welcomes our 2015 Associate Scientific Advisors.

–> <!–Cancer

The focus of this week’s issue is cancer to coincide with the AACR annual meeting

–>

In this week’s issue:


Research Articles

TYPE DIABETES

Hepatocyte-targeted InsB9–23 gene transfer protects from type 1 diabetes by inducing antigen-specific regulatory T cells.

CANCER

MGD006, a CD3xCD123 bispecific DART molecule intended for AML treatment, shows anticancer activity in mouse model and favorable pharmacodynamic and safety profile in nonhuman primates.

DIAGNOSTICS

With the use of digital genetic amplifiers and logic gates, prototype whole-cell biosensors can be engineered to detect diagnostic biomarkers in complex human clinical samples.

CANCER

Probiotics programmed to generate specific metabolites traffic from the gut to tumors and enable cancer detection through the urine.

DRUG DISCOVERY

A synthetic mycobacterial macrolide mycolactone decreases skin inflammation and inflammatory pain.

CANCER

SLC7A11, the catalytic subunit of the cystine/glutamate antiporter, System xc (SXC), is up-regulated in a subpopulation of patient gliomas, where it is responsible for excitotoxic glutamate release, accelerated tumor growth, and tumor-associated seizures.


Editorial

HEALTH CARE

Engineering sciences will play a vital role in delivering precision medicine to the bedside.


Focus

U.S. POLICY

Reductions in federal support and clinical revenue jeopardize biomedical research and, in turn, clinical medicine.


Editors’ Choice

COLORECTAL CANCER

Metabolomics identifies polyamines as a link between bacterial biofilms and colon cancer.

CANCER

Patient-derived tumor cell lines can be reliably generated as the basis of in vitro drug screens and personalized treatment plans.

IMMUNOTHERAPY

4-1BB can mitigate CAR endodomain-induced T cell exhaustion and prolong T cell survival.

NEUROPROTECTION

Edaravone, a small-molecule drug already in use outside the United States for stroke, reverses Alzheimer’s pathology in a transgenic mouse model.

ORGAN ON CHIP

Carefully engineered arrays of human cardiac cells allow high-throughput drug screening.

STEM CELLS

Mesenchymal stem cells clinging to graphene oxide microflakes display enhanced survival and engraftment in heart tissue.


Errata

 
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Science Signaling Table of Contents for 26 May 2015; Volume 8, Issue 378

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Science/AAAS Science Signaling

Table of Contents
 

05/26/15 Volume 8, Issue 378


f1000 Congratulations to authors of Science Signaling papers evaluated by Faculty of 1000. <!–
–>

In this week’s issue:


Focus

Cancer

Targeting a proteotoxic stress response pathway may improve therapeutic outcomes for HER2-positive breast cancer patients.


Research Articles

Cell Migration

A screen in Dictyostelium reveals that mTORC2 signaling participates in electrotaxis, as well as chemotaxis.

Biochemistry

Phosphorylation of a tyrosine in the disordered N-terminal region of ACTN4 functions as a switch exposing a second site for phosphorylation.

Cancer

Exploiting the dependence of some cancer cells on an ER stress response pathway may overcome resistance to some chemotherapeutics.


Podcasts

Cell Migration

A genetic screen identifies signaling pathways important for electrotaxis in the slime mold Dictyostelium discoideum.


Editors’ Choice

Metabolism

Resveratrol and metformin act in the intestine, stimulating a gut-brain-liver axis that improves organismal glucose metabolism.

Host-Microbe Interactions

Microbial-produced butyrate promotes intestinal epithelial barrier function by stabilizing HIF.

Cancer

Transfer RNA fragments induced by hypoxia inhibit metastasis.

Tissue Regeneration

Proteomic analysis reveals that restoring the transcription factor c-Myc to injured CNS neurons promotes their regeneration in mice.

Medicine

Targeting joint-lining fibroblast-like synoviocytes reduces the severity of arthritis.

Fibrosis

An αvβ1 inhibitor attenuated pulmonary and liver fibrosis in mouse models.

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Supersized fruit, RIKEN’s new strategy, & more

 

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Scientists find way to create supersized fruit
 

 
 

 

 

New RIKEN president hopes to hold onto young stars
 

 
 

 

 

Science still seen as male profession, according to international study of gender bias
 

 
 

 

 

Brazil decriminalizes efforts to turn its biota into gold
 

 
 

 

 

Caterpillars contort their bodies to look like bird poop
 

 
 

 

 

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Podcast: Ancient dogs, martian moons, and testing female athletes for testosterone
 

 
 

 

 

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Prisonized neighborhoods make ex-cons more likely to return to the slammer
 

 
 

 

 

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Latest from Science News: No-pain gene discovered

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05/26/2015

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No-pain gene discovered

BY Laura Sanders,

Scientists have identified a new genetic culprit for the inability to perceive pain. Read More

Context

Nash’s mind left a beautiful legacy

BY Tom Siegfried,

The death of game theory pioneer John Nash ends a dramatic story of genius. Read More

For Daily Use

Here’s what game theory says about how to win in semifinals

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Game theory informs competitors facing off in a semifinal whether to go all out or save energy for the final. Read More

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Contorted caterpillars, Brazil’s biota, & more

 

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22 May 2015

 

 

 

Science still seen as male profession, according to international study of gender bias
 

 
 

 

 

Brazil decriminalizes efforts to turn its biota into gold
 

 
 

 

 

Caterpillars contort their bodies to look like bird poop
 

 
 

 

 

Top stories: Homebrewed heroin, jumping spiders, and fusion energy
 

 
 

 

 

Announcing the 2015 Dance Your Ph.D. contest!
 

 
 

 

 

Podcast: Ancient dogs, martian moons, and testing female athletes for testosterone
 

 
 

 

 

Bipartisan Senate coalition calls for boost in energy research
 

 
 

 

 

House spending panel does its best to hide large cut to NSF social and geosciences research
 

 
 

 

 

Prisonized neighborhoods make ex-cons more likely to return to the slammer
 

 
 

 

 

House committee approves bill on speeding medical innovation
 

 
 

 

 

Researchers turn to volunteer readers to speed research on rare genetic disorder
 

 
 

 

 

Gene turns female mosquitoes into males
 

 
 

 

 

Yeast can live with human genes
 

 
 

 

 


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Editor’s picks: Health risks of the American diet, earliest stone tools, stag beetles’ weighty problem, & what game theory says about winning playoffs

Science News Editor’s Picks

05/24/15

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Typical American diet can damage immune system

By Laura Beil

The typical American diet sends our good and bad gut microbes out of balance and can lead to inflammation and a host of problems. Read More

News

Earliest known stone tools unearthed in Kenya

By Bruce Bower

East African discoveries suggest stone-tool making started at least 3.3 million years ago. Read More

News

Snagging blood clots upgrades stroke care

By Nathan Seppa

A new device threaded up to the brain via catheter can unblock vessels in cerebral arteries, studies show. Read More

News

Octopuses can ’see’ with their skin

By Susan Milius

Eyes aren’t the only cephalopod body parts with light-catching molecules. Read More

Science Visualized

Male stag beetles face weighty problem for flight

By Susan Milius

Male stag beetles need enormous mandibles to fend off other males and find a mate, but computer simulations show that the giant jaws make running and flying very difficult. Read More

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Weekly Headlines
 

22 May 2015

This week’s news from Science and ScienceInsider

22 May 2015 | SOCIAL SCIENCES
But the more women in the field, the less people feel this way
22 May 2015 |
22 May 2015 | BIOLOGY
New law eases draconian measures that brought bioprospecting to a standstill
22 May 2015 | PLANTS ANIMALS
Larvae bent into feces-like squiggles are more off-putting to predators
22 May 2015 | SCIENTIFIC COMMUNITY
This week’s top science news
22 May 2015 |
22 May 2015 |
22 May 2015 | PEOPLE EVENTS
Show us your graduate work … in dance form
22 May 2015 |
22 May 2015 | SCIENTIFIC COMMUNITY
Listen to a roundup of some of our favorite stories from the week
22 May 2015 | FUNDING
Senate version is more generous than COMPETES bill passed by the House
22 May 2015 | FUNDING
Those fields would lose 16% after lawmakers protect other scientific disciplines within a nearly flat budget
22 May 2015 | SOCIAL SCIENCES
When former prisoners flock together, more land back in jail
21 May 2015 | FUNDING
Latest version of 21st Century Cures Act contains NIH funding tweaks, new money for FDA
21 May 2015 | BIOLOGY
Mark2Cure curation project aims to review up to 10,000 papers
21 May 2015 |
21 May 2015 | BIOLOGY
Strategy could help combat yellow fever and other diseases
21 May 2015 | BIOLOGY
New study shows that half of yeast genes can be replaced by their human counterparts
21 May 2015 | PHYSICS
After decades of slow progress with doughnut-shaped reactors, magnetic fusion labs are gambling on a redesign
21 May 2015 |


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Latest from Science News for Students: Collecting trash in space

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05/23/2015

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Collecting trash in space

By Sid Perkins,

Space junk threatens satellites that cost millions of dollars. But one teen has come up with an idea to collect and dispose of that orbiting trash. Read More

Animals, Brain & Behavior, Microbes, Fungi & Algae

The bugs within us

By Roberta Kwok,

Hordes of bacteria live inside people and other animals. This ‘microbiome’ can affect the development of the blood-brain barrier, food choices — even mating. Read More

Brain & Behavior

Studying? Don’t answer that text!

By Sid Perkins,

Homework time? Put away the cell phone. Responding to texts gets in the way of learning and test-taking, teen researchers show. Read More

Plants

Picture This: The world’s biggest seed

By Susan Milius,

This monster seed develops on a super-slow-growing island palm. Key to that palm’s survival are leaves that funnel fertilized water to nutrient-starved roots. Read More

Materials Science, Technology & Engineering

Keeping roofs cooler to cut energy costs

By Sid Perkins,

Cool it! A cheap paint-on coating for roofing shingles could help reduce a home’s heating bills and might even trim urban ozone levels, a teen shows. Read More

Animals, Body & Health, Genetics

Catching ZZZs may retrieve lost memories

By Laura Sanders,

Forgetful? Maybe you’ve forgotten to get enough shuteye. A study in fruit flies suggests that a good sleep can boost their ability to remember things. Read More

Technology & Engineering

Teens want to make windshield wipers obsolete

By Sid Perkins,

Windshield wipers often can’t keep up with the rain. High-intensity air sprays might one day take their place, according to research by two teens. Read More

Animals

Pesticides offer bees a risky allure

By Susan Milius,

Honeybees and bumblebees sometimes cannot taste or avoid pesticides called neonicotinoids. And that may expose some of these important pollinators to harm. Read More

Animals, Dinosaurs & Fossils

Picture This: The real ‘early bird’

By Meghan Rosen,

Long before dinosaurs went extinct, birds were emerging on Earth. These hummingbird-size wading birds are the earliest known ancestors of today’s birds. Read More

Oceans, Weather & Climate

Carbon dioxide levels rise fast and high

By Thomas Sumner,

The buildup of carbon dioxide in the atmosphere is rising faster than at any time since dinosaurs roamed the Earth. The burning of fossil fuels is largely to blame. Read More

Inside Student Science

Eureka! Lab

The science of getting away with murder »
Intel International Science and Engineering Fair concludes with awards ceremony »
Teen finds more graphic heroines are ‘super’ »
Read More »
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Science/AAAS Science

Weekly News
 

05/22/15 Volume 348, Issue 6237

A roundup of the week’s top stories in Science:


In Brief

In science news around the world, the United States’ Advanced Research Projects Agency-Energy, part of the Department of Energy, announces a slew of projects that it hopes will break the logjam in fusion research, the National Academies launches an initiative to discuss the ethically fraught topic of human embryo gene editing, and German scientists join other genetically modified (GM) foods proponents in an unusual gamble: urging the country’s government to label all GM products to convince people there’s nothing to be afraid of. Also, agriculturalist Cary Fowler discusses his work to protect the genetic diversity of the world’s crops, featured in the upcoming documentary Seeds of Time. And researchers are closing in on a long-standing goal of engineering genes into yeast that will enable the microbes to make opiates—which, policy experts worry, could make it too easy for narcotics dealers to manufacture the drugs as well.


In Depth

Microbiology

One of the fastest growing trees, poplars, may rely on tiny microbes in their leaves to fuel their growth. For more than a decade, a lone researcher has been building a case for nitrogen fixation by bacteria living in poplar leaves. There have been many claims of nitrogen fixation in plants outside nodules where it was known to occur for more than a century. Newly reported experiments involving rice grown on nitrogen-poor soil and poplar cuttings put in air with heavy nitrogen should help convince the skeptics. In addition, another researcher finds evidence of nitrogen fixation in the needles of limber pine and Englemann spruce. If these bacteria prove to be widespread, they could be used to boost crop production on marginal soils.

Earth Science

Vietnam’s Mekong River delta—the world’s third largest delta—is sinking, putting some 20 million people and vast swaths of fertile farmland at risk. Recent research has found that the delta, which covers some 55,000 square kilometers and sits about 2 meters above sea level, is subsiding at rates of 1 to 4.7 centimeters per year. Among the culprits: levees that prevent sediment from spilling out of rivers and collecting in the delta, and some 1 million wells drilled since the 1980s for drinking and agriculture. If groundwater depletion continues at present rates, researchers estimate, the delta could sink by nearly a meter by midcentury. Now, an alliance of Vietnamese and Dutch scientists is trying to get ahead of the problem. They met in Vietnam recently to launch the Rise and Fall project, a $1 million, 5-year effort to better understand what’s driving Mekong delta subsidence and develop strategies to reverse it. “We know virtually nothing about what’s beneath our feet,” said geographer Philip Minderhoud, a co-leader of the project and doctoral candidate at Utrecht University in the Netherlands, during the 11 March gathering. New studies aim to change that.

Biomedical Research

Fifteen years after learning about the medical benefits of cannabis from patients in a sickle cell clinic in Kingston, Mark Ware is studying the drug on a grand scale. A pain management researcher at McGill University Health Centre in Montreal, Canada, he directs the Quebec Cannabis Registry, a new, one-of-a-kind database that aims to gather information on every patient prescribed marijuana in the province over the next 10 years—an estimated 3000 in all. By collecting data on symptoms, dosage, improvement, and side effects, the registry, launched on 11 May and funded by a grant from the nonprofit Canadian Consortium for the Investigation of Cannabinoids, aims to fill gaps in knowledge about the efficacy and safety of medical marijuana. Even as more and more states and countries legalize pot for medical purposes, clinical trials of smoked cannabis remain rare. “Decisions [about medical marijuana] are being made at the ballot box instead of in the laboratories,” says Raul Gonzalez, a psychologist at Florida International University in Miami who studies cognitive effects of cannabis use in HIV/AIDS patients.

Human Evolution

A young man who lived in Romania 37,000 to 42,000 years inherited as much as one-tenth of his DNA from a Neandertal ancestor, according to a new study of ancient DNA. Ever since spelunkers found a robust jawbone in a cave in Romania in 2002, some paleoanthropologists have thought that its huge wisdom teeth and other features resembled those of Neandertals even though the fossil was a modern human. Now, by sequencing informative parts of the Romanian man’s genome, an international team of researchers has found that he had inherited 4.8% to 11.3% of his genome from a Neandertal who lived only 200 years or so previously, according to a talk this month at Cold Spring Harbor Laboratory in New York. The finding confirms that Neandertals interbred with modern humans more than once, and it is the first evidence that the two types of humans had a liaison in Europe.

Europe

Surrounded by six Nobel laureates, European Commission President Jean-Claude Juncker announced his long-awaited plan to restructure the commission’s scientific advice process on 13 May. In the commission’s new Science Advice Mechanism, a high-level group of seven scientists will channel the input of national academies and learned societies to give the commission the best scientific advice. When Juncker took office last November, he didn’t renew the position of chief scientific adviser, which some scientists took as a sign of disregard for science. Last week’s announcement provided critics with some reassurance, but many details remain to be worked out, including how the high-level group will operate effectively.

Regenerative Medicine

In the 1950s, researchers observed that when the circulation of a young mouse is connected to an old mouse, the elderly animal seems to be rejuvenated. Since 2005, a handful of labs have been hotly pursuing the molecules responsible, hoping to harness them to slow or reverse aging in people. One in particular stood out: a protein found in young blood known as GDF11. In several high-profile papers, two of them published last year in Science, a Harvard University team reported that GDF11 levels decline in older animals, and that replacing it rebuilds muscles, the brain, and the heart. But work described this week in Cell Metabolism by a Novartis team challenges GDF11’s rejuvenating powers. Their paper casts doubt on the assays used in the earlier research and suggests that GDF11 actually inhibits muscle regeneration.


Feature

Antibiotics face an unfortunate paradox: Though we desperately need new drugs to combat the growing threat of resistant bacteria, their discovery and development has ground to a crawl. A series of financial, scientific, and regulatory setbacks have driven companies out of the field, and many of the investors who could help get new drug candidates to the clinic are skeptical that such drugs can be profitable. Now, some are heralding new signs of life, including the return of a few pharmaceutical superpowers. But will desperate moves by governments to entice companies and researchers be enough to spring the next generation of antibiotics from the lab?

The quest for fusion energy is more than 60 years old and the current great hope, the $18 billion ITER reactor, won’t hit its stride until 2027 at the earliest. Surely there is a quicker and cheaper route. Behold the spherical tokamak, a plumped-up version of the mainstream tokamak reactor shaped more like a cored apple than the traditional doughnut. That simple shape change could open the way to a fusion power plant that would match ITER’s promise, without the massive scale. The world’s two front-rank machines—in the United States and the United Kingdom—are both being upgraded with stronger magnets and more powerful heating systems. Soon they will switch on and heat hydrogen fuel to temperatures much closer to those needed for generating fusion energy. If they perform well, spherical tokamaks could change the shape of fusion’s future.


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