How vaccines might make diseases deadlier, aggressive birds, & more

 

Latest News and Headlines

27 July 2015

 

 

 

Why city birds are more aggressive than country birds
 

 
 

 

 

Could some vaccines make diseases more deadly?
 

 
 

 

 

Some U.S. coastal cities at higher risk of flooding than thought
 

 
 

 

 

Glacierlike ice flows detected on Pluto’s surface
 

 
 

 

 

U.S. House moves to block labeling of GM foods
 

 
 

 

 

Marine toxin puts mice to sleep
 

 
 

 

 

First malaria vaccine takes a key step forward
 

 
 

 

 

Top stories: A four-legged snake, ordinary microbes in an extraordinary place, and the search for extraterrestrial life
 

 
 

 

 

Single-molecule Tetris allows scientists to observe DNA at the nanoscale
 

 
 

 

 

Molecular microscope finds hidden AIDS virus in the body
 

 
 

 

 

Cool new material could make fuel cells cheaper
 

 
 

 

 

Plant coats itself in dead bodies to defend against pests
 

 
 

 

 

Isabela the whale sets migration record
 

 
 

 

 

 

 
 

 

   

 

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Latest from Science News: Antibody that fights MERS found

Latest from Science News

07/28/2015

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News in Brief

Antibody that fights MERS found

BY Sarah Schwartz,

Scientists have isolated a human immune protein that fights the MERS virus in mice. Read More

News

Microbes’ role in truffle scents not trifling

BY Beth Mole,

Truffles make their prized aroma with a little help from their microbes, chemists suggest. Read More

News

Laser light made inside cells

BY Andrew Grant,

Microscopic beads and oil droplets become lasers when implanted into cells. Read More

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Dead bugs of armor, Isabela’s record setting migration, and the promise of cheaper fuel cells

 

Latest News and Headlines

24 July 2015

 

 

 

Marine toxin puts mice to sleep
 

 
 

 

 

First malaria vaccine inches forward
 

 
 

 

 

Top stories: A four-legged snake, ordinary microbes in an extraordinary place, and the search for extraterrestrial life
 

 
 

 

 

Single-molecule Tetris allows scientists to observe DNA at the nanoscale
 

 
 

 

 

Molecular microscrope finds hidden AIDS virus in the body
 

 
 

 

 

Cool new material could make fuel cells cheaper
 

 
 

 

 

Plant coats itself in dead bodies to defend against pests
 

 
 

 

 

Isabela the whale sets migration record
 

 
 

 

 

Podcast: Sea creatures that make clouds, shark attacks, and autism rates
 

 
 

 

 

Its like going to Pluto and seeing McDonalds
 

 
 

 

 

NASA spots most Earth-like planet yet
 

 
 

 

 

Special Issue: From mammoths to Neandertals, ancient DNA unlocks the mysteries of the past
 

 
 

 

 

Four-legged snake fossil stuns scientists—and ignites controversy
 

 
 

 

 

 

 
 

 

   

 

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Editor’s picks: Earth’s cousin, Native American origins debated, latest from Pluto, a four-legged snake, brain-eating amoebas, and dolphins’ dark side

Science News Editor’s Picks

07/26/15

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Kepler telescope identifies new ’habitable zone’ planet

By Sarah Schwartz

A new analysis of data from NASA’s Kepler mission has uncovered a planet orbiting a sunlike star that could be Earth’s “cousin.” Read More

News

Ice flows, haze offer more clues to Pluto’s geology

By Ashley Yeager

New Horizons’ latest data reveal more hints about Pluto’s shrinking atmosphere and possible underground ocean. Read More

News

Research teams duel over Native American origins

By Tina Hesman Saey

Genetic link between Australia and the Amazon fuels two interpretations of Native American origins. Read More

News

Museum fossil links snakes to lizards

By Meghan Rosen

Scientists have discovered the fossilized remains of the first four-legged snake. The fossil bridges the gap between snakes and lizards. Read More

News

Sudden heat spikes did in Ice Age’s mammoth mammals

By Thomas Sumner

Abrupt warming and excessive hunting by ancient humans were responsible for the disappearance of many large mammals, including woolly mammoths, during Earth’s last glacial period. Read More

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Science News Weekly Alert


Science/AAAS News from Science

Weekly Headlines
 

24 July 2015

This week’s news from Science and ScienceInsider

24 July 2015 | BIOLOGY
Compound isolated from venom of cone snail could treat sleep disorders in humans
24 July 2015 | EUROPE
European regulator says benefits outweigh risks, but hurdles remain
24 July 2015 | SCIENTIFIC COMMUNITY
This week’s top science news
24 July 2015 | CHEMISTRY
Strategy could improve the way scientists extract information from DNA
24 July 2015 | HEALTH
A powerful new technique promises to help cure efforts
24 July 2015 | CHEMISTRY
Ceramics cooked at lower temperatures boost efficiency
24 July 2015 | BIOLOGY
Serpentine columbine lures bugs to their doom, drawing in predators that kill munching moths
24 July 2015 | PLANTS ANIMALS
Dual sighting connects blue whales in Chile and the Galapagos
24 July 2015 | SCIENTIFIC COMMUNITY
Listen to a roundup of some of our favorite stories from the week
23 July 2015 | BIOLOGY
Researchers find ordinary microbes in an extraordinary place
23 July 2015 | SPACE
Alien world is only a bit warmer than ours, but has twice the gravity
23 July 2015 | ARCHAEOLOGY
Powered by next-generation sequencing technologies, ancient DNA enters its golden age
23 July 2015 |
23 July 2015 | PALEONTOLOGY
Ancient fossil appears to be an early snake, but scientific debate about its relations—and the relic itself—are stewing
23 July 2015 | EVOLUTION
Abrupt climate changes may have predisposed big ice age mammals to extinction, argues new study
23 July 2015 |
23 July 2015 | BIOLOGY
Adding pigment may shield eggs from UV radiation
23 July 2015 | SPACE
Science goes behind the scenes as five scientists work through the night to make the best image of Pluto the world had ever seen
22 July 2015 | HEALTH
Widely anticipated clinical trial results elicit mixed reactions
22 July 2015 | CHEMISTRY
Explosion in research lab linked to meth production


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Latest from Science News for Students: To protect kids, get the lead out!

Latest from Science News For Students

07/25/2015

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Brain & Behavior, Environment & Pollution

To protect kids, get the lead out!

By Kathiann Kowalski,

Lead poisons hundreds of thousands of children. In Chicago, experts show how the toxic metal hurts test performance in school. Read More

Mathematics, Brain & Behavior

Explainer: Correlation, causation, coincidence and more

By Kathiann Kowalski,

Don’t jump to conclusions from statistics unless you understand correlation, causation, coincidence and confounding factors. Read More

Chemistry, Plants

Secret to rose scent surprises scientists

By Beth Mole,

Scientists discovered the molecular tool that roses use to make fragrance. And it wasn’t what they expected. Read More

Planets

News Brief: Venus may have active volcanoes

By Christopher Crockett,

The Venus Express spacecraft detected flashes of infrared light that may be from hot lava erupting from active volcanoes. Read More

Young Scientists, Technology & Engineering

Inspired minds: Role models come from across the globe

By Kathiann Kowalski,

Innovators come from everywhere, as shown by the role models cited by students taking part in the 2015 Broadcom MASTERS International program. Read More

Brain & Behavior

Smell test may detect autism

By Meghan Rosen,

A new study finds that kids with autism sniff foul scents for as long as pleasing ones. The finding could lead to a test to diagnose the disorder. Read More

Inside Student Science

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Scientists Say: Hurricane or typhoon? »
Cookie Science 17: Posters — the good and the bad  »
Scientists Say: Satellite »
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Weekly News

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Wednesday, July 29, 2015, at 9 a.m. Pacific, 12 noon Eastern, 5 p.m. UK, 6 p.m. Central Europe
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Science/AAAS Science

Weekly News
 

07/24/15 Volume 349, Issue 6246

A roundup of the week’s top stories in Science:


In Brief

In science news around the world, Chile and the Canary Islands are selected to share the world’s largest and most powerful gamma-ray observatory, the new Joep Lange Institute opens in Amsterdam this year to honor the HIV researcher killed in last year’s attack on a Malaysia Airlines flight, Nigeria hits an important milestone with its last known case of wild polio occurring a year ago, the five nations ringing the Arctic Ocean sign a declaration to prevent unregulated commercial fishing in its waters, and more. Also, scientists hope to limit damage done to vegetable crops by releasing genetically altered diamondback moths.


In Depth

Planetary Science

On 14 July, NASA’s New Horizons spacecraft flew past Pluto, the first reconnaissance of a body in the Kuiper belt, the zone of icy objects beyond the orbit of Neptune. With the flyby complete and the data trickling home, mission scientists focused on a new challenge: making sense of an unexpectedly complex and dynamic world. Pluto contains ice mountains and smooth, crater-free plains—features suggestive of active geological processes. But mission scientists are debating whether these are the result of an atmosphere that shapes the landscape from above, or residual heat in Pluto’s interior that could be driving fresh flows of ice onto the surface.

Human Genetics

Researchers still argue about how and when the first Americans settled in North and South America, and particularly about whether they came in one or multiple waves. Two new papers, one in Science and the other in Nature, attempt to shed light on this question, but they come to different conclusions: The Science team finds one wave, and the Nature team finds two. The two research groups do agree on one thing, however—some of today’s Native Americans have the genes of ancient people from Australia and Melanesia in the southwest Pacific Ocean. Knowing whether that mysterious genetic contribution came early, as the Nature team thinks, or much later, as the Science team concludes, may hold the key to remaining riddles about the peopling of the Americas.

HIV/AIDS

An 18-year-old woman in France who became infected with HIV as a baby went off antiretroviral drugs 12 years ago and the virus has yet to return to detectable levels on standard blood tests. The woman is not cured, stressed the Pasteur Institute’s Asier Sáez-Cirión, who presented details about the case at an international AIDS conference taking place in Vancouver, Canada, this week: His group found HIV DNA in her blood cells and prodded them to make new copies of the virus. Sáez-Cirión has been following a small cohort of other so-called “posttreatment controllers,” but the other all became infected with the virus as adults. He noted that the woman, like other posttreatment controllers, was distinct from the 1% of people known as elite controllers who similarly maintain undetectable plasma levels of HIV without treatment. But the elite controllers, in contrast to posttreatment controllers, keep the virus in check from the earliest days of the infection and have an immune response in many cases that explains how they thwart the virus. The hope is that this new case can help clarify how posttreatment controllers keep the virus in check and then use this information to inform both cure and vaccine research.

Nuclear Diplomacy

When Iran agreed last week to dismantle large chunks of its nuclear infrastructure, it won more than the promise of relief from crippling economic sanctions. If the agreement survives strong opposition in the U.S. Congress, Iran can expect a rapid expansion of scientific cooperation with Western powers. As its nuclear facilities are repurposed, scientists from Iran and abroad will team up in areas such as nuclear fusion, astrophysics, and radioisotopes for cancer therapy. Some scientific activity will take place at the Fordow uranium enrichment facility, which Iran will convert into an international nuclear, physics, and technology center. Russia will help reconfigure 348 centrifuges there to produce stable isotopes for industry. And Fordow may host a small linear accelerator for basic research in nuclear physics and astrophysics. Iran has agreed to invite proposals for collaborative projects at Fordow and hold an international workshop to review them.

Astronomy

Are we alone in the universe? Russian internet entrepreneur Yuri Milner wants to know—and he’s willing to pay for an answer. Milner has donated $100 million for a 10-year effort to detect signals from other civilizations in the universe, an effort that has drawn high-profile support from physicists and astronomers, including Stephen Hawking. The new project, dubbed “Breakthrough Listen,” will boost funding for such searches fivefold and will be 50 times as sensitive as previous efforts and cover 10 times more of the sky. In addition, the project will throw a lifeline to budget-strapped radio telescopes, and it will develop new technology to monitor 10 billion radio frequencies simultaneously.


Feature

Powered by advances in sequencing technology, the field of ancient DNA has succeeded beyond all expectations, helping researchers to retrieve the entire genomes of Neandertals and other kinds of ancient humans and transforming the picture of human evolution. Researchers have also delved into the genomes of ancient animals—the oldest so far is a 700,000-year-old horse. For years, the methods of extracting and analyzing degraded DNA molecules were so tricky that they remained the exotic province of a few high-profile labs. But now the techniques are spreading. As researchers from many fields realize just how much ancient DNA can tell them, the method is being applied to everything from the peopling of Europe to how plants and pathogens respond to climate change. The explosion of research is transforming the study of the past.

New breakthroughs in ancient DNA are causing a revolution in the study of human evolution. By sequencing ancient DNA from the fossils of human ancestors, researchers have recently discovered new types of ancient humans and revealed interbreeding between our ancestors and our archaic cousins, including Neandertals. They are exploring how that genetic legacy is shaping our health and appearance today. And now that investigators can sequence entire ancient populations, ancient DNA is revealing that humans on every continent are a complex mix of archaic and modern DNA. Ancient DNA is enabling researchers to answer questions they could not previously address. As a result, archaeologists, anthropologists, and population geneticists are now seeking collaborations with ancient DNA researchers.

For decades, scientists have debated why the so-called megafauna disappeared from the Arctic and much of the rest of the world. Now, ancient DNA data have entered the fray. By sequencing whatever DNA emerges (called eDNA) from even a thimbleful of ancient soil, researchers are reconstructing ancient ecosystems as far back as 700,000 years ago with astonishing clarity. In 2011, they documented that a decline in the big herbivores’ favorite foods as the ice age thawed coincided with the animals’ disappearance. And a paper this week shows that local extinctions were also tied to bursts of warming. Other eDNA data—in this case from lake sediments—are illuminating how the postglacial thaw transformed other landscapes too, such as temperate forests. Finally, eDNA from Antarctic ice cores promises to reveal what happened in the Southern Hemisphere many thousands of years ago.

From muddy cliffs in Canada’s Yukon territory, where miners flush out gold-laden gravel, Beth Shapiro is netting a different sort of treasure: DNA from thousands of mammoth, bison, horse, and other mammal bones. The goal of this evolutionary biologist from the University of California, Santa Cruz, is to paint a picture of the animal community here during the past 80,000 years. Mining has exposed fossils and layers of volcanic ash, which have been dated with radiometric methods, so Shapiro can pin down the ages of fossils back to before 40,000 years ago, the limit of radiocarbon dating. And thanks to the ever-shrinking cost of sequencing, Shapiro can analyze hundreds of individuals per species to learn about important genetic changes. The project’s first papers are expected next year.

From muddy cliffs in Canada’s Yukon territory, where miners flush out gold-laden gravel, Beth Shapiro is netting a different sort of treasure: DNA from thousands of mammoth, bison, horse, and other mammal bones. The goal of this evolutionary biologist from the University of California, Santa Cruz, is to paint a picture of the animal community here during the past 80,000 years. Mining has exposed fossils and layers of volcanic ash, which have been dated with radiometric methods, so Shapiro can pin down the ages of fossils back to before 40,000 years ago, the limit of radiocarbon dating. And thanks to the ever-shrinking cost of sequencing, Shapiro can analyze hundreds of individuals per species to learn about important genetic changes. The project’s first papers are expected next year.

Ancient DNA may be entering its golden age, but some researchers have their eyes on another molecule that may offer new view of the past: protein, which has some advantages over its more famous cousin. Tissues are full of protein, making analysis easier. Proteins also resist the ravages of time far better than fragile DNA and so have the potential to look further back in time—researchers have identified 300 million year old proteins in fish fossils. Ancient proteins have already illuminated a few far-flung corners of past life, including identifying the family tree of strange, extinct South American mammals that flummoxed even Charles Darwin. The method appears particularly promising in archaeology, where it can reveal the diets and lifestyles of past cultures. Still, the technique has a long way to go before it reaches the maturity of paleogenetics, chiefly because methods to sequence amino acids lag behind DNA sequencing.


New Science/AAAS Webinar
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This Week In Science

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Science/AAAS Science

This Week in Science
 

07/24/15 Volume 349, Issue 6246

Editor summaries of this week’s research papers.


This Week in Science

Plant Pathogens

Stretchy Electronics

Neurodevelopment

Autoimmune Disease

Nanocatalysts

Quantum Information

Evolution

Metabolism

Deep Biosphere

Human Microbiota

Applied Origami

Intracellular Transport

Human Immunology


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A four-legged snake, ancient DNA, & the making of Pluto’s iconic image

 

Latest News and Headlines

23 July 2015

 

 

 

Its like going to Pluto and seeing McDonalds
 

 
 

 

 

NASA spots most Earth-like planet yet
 

 
 

 

 

Special Issue: From mammoths to Neandertals, ancient DNA unlocks the mysteries of the past
 

 
 

 

 

Four-legged snake fossil stuns scientists—and ignites controversy
 

 
 

 

 

Hot spells doomed the mammoths
 

 
 

 

 

Stink bugs protect their eggs by changing their color
 

 
 

 

 

How Plutos most spectacular image was made—and nearly lost
 

 
 

 

 

Antibody drugs for Alzheimers stir hope and doubts
 

 
 

 

 

Breaking bad at NIST
 

 
 

 

 

Surprise: Snakes don’t kill by suffocation
 

 
 

 

 

Eye drops could dissolve cataracts
 

 
 

 

 

Senator offers tantalizing prospect of regulatory relief for biomedical researchers
 

 
 

 

 

A safer estrogen therapy for women?
 

 
 

 

 

 

 
 

 

   

 

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Table of Contents for 24 July 2015; Vol. 349, No. 6246

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Science/AAAS Science

Table of Contents
 

07/24/15 Volume 349, Issue 6246

In this week’s issue:


Research Summaries

Editor summaries of this week’s papers.

Highlights of the recent literature.


Editorial


In Brief

A roundup of weekly science policy and related news.


In Depth

Planetary Science

New Horizons delights researchers with stark vistas and perplexing puzzles.

Human Genetics

Rival papers compete to explain surprising link to Australia and Melanesia.

HIV/AIDS

After 12 years off treatment, a young woman has had remarkable—and unexplained—control of her infection.

Nuclear Diplomacy

Researchers to collaborate at repurposed nuclear facilities.

Astronomy

Yuri Milner hopes that $100 million can answer one of humanity’s most enduring questions.


Feature

After a stormy adolescence, the field of ancient DNA enters its golden era.

As it smashes disciplinary boundaries, ancient DNA is rewriting much of human prehistory.

Sugar cubes of buried soil reveal how ecosystems warmed after the last ice age.

Taking advantage of fossils exposed by miners, an evolutionary biologist probes the adaptations of ancient mammals.

Most ancient DNA comes from frigid environs. Can new methods sample hot and humid locales?

Paleoproteomics hustles to catch up with its more developed cousin.


Working Life


Letters


Books et al.

Ancient DNA

Confronting the technical challenges of reversing extinction

Immunology

Widely used in science and medicine today, monoclonal antibodies got off to a rocky start

A listing of books received at Science during the week ending 17 July 2015.


Policy Forum

Science and Government

All-or-none regulatory systems are not adequate for revolutionary innovations

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Public Health

Different strategies are coming together to provide insights for an effective HIV vaccine


Perspectives

Paleontology

A long-bodied fossil snake retains fore- and hindlimbs [Also see Report by Martill et al.]

Microbial Ecology

Scientists find active life 2.5 km beneath the sea floor [Also see Report by Inagaki et al.]

Immunology

Individuals lacking a protein expressed in T cells have low CTLA-4 and develop autoimmunity [Also see Report by Lo et al.]

Chemistry

Sophisticated shape-controlled design is yielding ever more active nanocatalysts [Also see Report by Zhang et al.]

Gene Regulation

MicroRNAs mediate silencing through messenger RNA degradation and translation repression

Stretchable Electronics

Carbon nanotubes wrapped around rubber cores create resilient conducting fibers [Also see Report by Liu et al.]


Reviews


Reports

A kinematic model enables application of origami patterns for zero-thickness sheets to panels made from thick materials.

Rubber fibers coated with sheets of carbon nanotubes form highly stretchable conducting wires. [Also see Perspective by Ghosh]

A collective mode of a ferromagnetic sphere is strongly coupled to a qubit in a cavity.

Noncollinear magnets hybridize the spin and charge states of a double quantum dot, enabling spin-photon coupling in a cavity.

Nanocage electrocatalysts can increase the utilization of platinum and improve activity by controlling surface structure. [Also see Perspective by Strasser]

A ~100-million-year-old fossil of a snake with four legs sheds light on snake evolution. [Also see Perspective by Evans]

Coal beds more than 2 kilometers below the seafloor host methanogenic bacteria related to those found in forest soils. [Also see Perspective by Huber]

In mice, neuronal plasticity in later life depends on neuronal activity during a critical period earlier in development.

The endoplasmic reticulum proteins ORP5 and ORP8 mediate PI4P-phosphatidylserine exchange at contact sites with the plasma membrane.

A phosphatidylinositol 4-phosphate gradient drives phosphatidylserine transport from the endoplasmic reticulum to the plasma membrane.

A rare autoimmune disorder is caused by aberrant degradation of a potent inhibitory immune receptor. [Also see Perspective by Sansom]


Technical Comments


Podcast

On this week’s show: Ancient DNA and a roundup of daily news stories.


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A weekly roundup of information on newly offered instrumentation, apparatus, and laboratory materials of potential interest to researchers.


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